LOCUS CS810-Final-03-T 4273 bp DNA circular 24-OCT-2014 DEFINITION Complementary copy of 111. SOURCE ORGANISM COMMENT http://www.informaxinc.com/ COMMENT This file is created by Vector NTI http://www.invitrogen.com/ COMMENT ORIGDB|GenBank COMMENT VNTDATE|712682972| COMMENT VNTDBDATE|712683169| COMMENT LSOWNER| COMMENT VNTNAME|CS810-Final-03-TB-T4 RNA Ligase 2, truncated K227Q| COMMENT VNTAUTHORNAME|Demo User| COMMENT Vector_NTI_Display_Data_(Do_Not_Edit!) COMMENT (SXF COMMENT (CGexDoc "CS810-Final-03-TB-T4 RNA Ligase 2, truncated K227Q" 0 4273 COMMENT (CDBMol 0 0 1 1 1 0 0 1520768044 0 "" "" 0 0 0 0 (CObList) (CObList) COMMENT (CObList) (CObList) -1 "") COMMENT (CDocSetData 1 1 0 0 0 0 "MAIN" 1 1 1 1 0 0 1 1 1 0 10 10 4294967295 50 0 COMMENT 1 0 (CHomObj 0 0 0 3 75) (CWordArray) (CWordArray) COMMENT (CStringList "ApaLI" "AvaI" "BamHI" "ClaI" "EcoRI" "HindIII" "NcoI" COMMENT "PstI" "SmaI" "XmaI") (CStringList "atg" "gtg") COMMENT (CStringList "taa" "tga" "tag") (CObList) 1 "{(0,1),2}" 0 0 "" 0 COMMENT 4294967295 0 0 0 0 0 0 0 "MAIN" 0 0 30 0 COMMENT (CProteinMotifSearchObject 70 20 1 1 1 1 0 0 1 0 0 0 0 0)) COMMENT (CMolPar 0 0 1 3175 3924 1 4273 0 0 0 0 0 0 0 0) (CStringList) COMMENT (CStringList) (CObList) (COAPar 25 250 50 0 6 4 3 7) COMMENT (COAPar 25 250 50 0 6 4 3 7) (COAPar 25 250 50 0 6 4 3 7) COMMENT (CObList COMMENT #0=(CRSite (CStringList) "ApaLI" "gtgcac" 2 0 3 433 0 926 0 2799 0 0 "") COMMENT #1=(CRSite (CStringList) "AvaI" "cycgrg" 2 0 3 1181 0 1191 0 3116 0 0 "") COMMENT #2=(CRSite (CStringList) "BamHI" "ggatcc" 2 0 1 3978 0 0 "") COMMENT #3=(CRSite (CStringList) "ClaI" "atcgat" 3 0 0 0 "") COMMENT #4=(CRSite (CStringList) "EcoRI" "gaattc" 2 0 3 3149 0 3470 0 3947 0 0 COMMENT "") #5=(CRSite (CStringList) "HindIII" "aagctt" 2 0 1 3996 0 0 "") COMMENT #6=(CRSite (CStringList) "NcoI" "ccatgg" 2 0 2 1270 0 1706 0 0 "") COMMENT #7=(CRSite (CStringList) "PstI" "ctgcag" 6 0 1 3148 0 0 "") COMMENT #8=(CRSite (CStringList) "SmaI" "cccggg" 4 0 1 1183 0 0 "") COMMENT #9=(CRSite (CStringList) "XmaI" "cccggg" 2 0 1 1181 0 0 "")) COMMENT (CObList COMMENT #10=(CFSignal (CObList) "T4 RNA Ligase 2,truncated K227Q" 21 0 0 3175 COMMENT 3924 0 (CStringList) (CStringList) 1 1 1 1 "3175..3924")) (CObList) COMMENT (CObList) (CObList) (CObList) (CObList) (CObList) COMMENT (CTextView 0 COMMENT #11=(CGroupPar (CParagraph 0 (0 0) 1 2 0 0 180) COMMENT (CObjectList COMMENT #12=(CRefLinePar COMMENT (CLinePar (CParagraph 0 (0 0) 0 2 0 0 233) COMMENT "CS810-Final-03-TB-T4 RNA Ligase 2, truncated K227Q" 2) 5 "" COMMENT 0 4) COMMENT #13=(CFolderPar COMMENT (CGroupPar (CParagraph 1 (0 0) 1 1 0 0 178) COMMENT (CObjectList COMMENT #14=(CLinePar (CParagraph 0 (0 0) 1 2 1 0 180) COMMENT "DNA 'CS810-Final-03-TB-T4 RNA Ligase 2, truncated K227Q'" COMMENT 1) COMMENT #15=(CLinePar (CParagraph 0 (0 0) 1 2 1 0 180) COMMENT "Complementary copy of 111." 1) COMMENT #16=(CLinePar (CParagraph 0 (0 0) 1 2 1 0 180) COMMENT "Local object" 1) COMMENT #17=(CLinePar (CParagraph 0 (0 0) 1 2 1 0 180) COMMENT "Created: 10/24/14 03:29\277\300\310\304" 1) COMMENT #18=(CLinePar (CParagraph 0 (0 0) 1 2 1 0 180) COMMENT "Last Modified: 10/24/14 03:32\277\300\310\304" 1) COMMENT #19=(CLinePar (CParagraph 0 (0 0) 1 2 1 0 180) COMMENT "length: 4273 bp" 1) COMMENT #20=(CLinePar (CParagraph 0 (0 0) 1 2 1 0 180) COMMENT "storage type: Basic" 1) COMMENT #21=(CLinePar (CParagraph 0 (0 0) 1 2 1 0 180) COMMENT "form: Circular" 1))) "General Description") COMMENT #22=(CFolderPar COMMENT (CGroupPar (CParagraph 2 (0 0) 1 1 0 0 178) COMMENT (CObjectList COMMENT #23=(CLinePar (CParagraph 0 (0 0) 1 2 1 0 180) COMMENT "Original Source Database: GenBank" 1) COMMENT #24=(CLinePar (CParagraph 0 (0 0) 1 2 1 0 180) COMMENT "Modification Date in the Original DB: 24-OCT-2014" 1))) COMMENT "Standard Fields") COMMENT #25=(CRefLinePar COMMENT (CLinePar (CParagraph 0 (0 0) 0 2 0 0 233) "Comments" 2) 1 "" COMMENT 0 0) COMMENT #26=(CFolderPar COMMENT (CGroupPar (CParagraph 8 (0 0) 1 2 0 0 178) (CObjectList)) COMMENT "Annotations") COMMENT #27=(CFolderPar COMMENT (CGroupPar (CParagraph 12 (6 0) 1 1 0 0 178) COMMENT (CObjectList COMMENT #28=(CFolderPar COMMENT (CGroupPar (CParagraph 21 (7 21 0) 1 1 1 0 178) COMMENT (CObjectList COMMENT #29=(CFolderPar COMMENT (CGroupPar COMMENT (CParagraph 3175 (3 #10# 0) 1 2 2 0 194) COMMENT (CObjectList COMMENT #30=(CLinePar COMMENT (CParagraph 0 (0 0) 1 2 3 0 180) COMMENT "Start: 3175 End: 3924" 1) COMMENT #31=(CLinePar COMMENT (CParagraph 0 (0 0) 1 2 3 0 180) COMMENT "Original Location Description:" 1) COMMENT #32=(CLinePar COMMENT (CParagraph 0 (0 0) 1 2 3 0 180) COMMENT " 3175..3924" 1))) COMMENT "T4 RNA Ligase 2,truncated K227Q"))) COMMENT "Misc. Feature (1 total)"))) "Feature Map") COMMENT #33=(CFolderPar COMMENT (CGroupPar (CParagraph 13 (0 0) 1 1 0 0 178) COMMENT (CObjectList COMMENT #34=(CRSFolderPar COMMENT (CFolderPar COMMENT (CGroupPar (CParagraph 83957392 (8 0) 1 1 1 0 178) COMMENT (CObjectList COMMENT #35=(CGroupPar COMMENT (CParagraph 0 (10 #0# 0) 1 2 2 0 180) COMMENT (CObjectList COMMENT #36=(CLinePar COMMENT (CParagraph 0 (1 #0# 1) 1 2 2 0 191) COMMENT " N1: 433 " 1) COMMENT #37=(CLinePar COMMENT (CParagraph 0 (1 #0# 2) 1 2 2 0 191) COMMENT " N2: 926 " 1) COMMENT #38=(CLinePar COMMENT (CParagraph 0 (1 #0# 3) 1 2 2 0 191) COMMENT " N3: 2799 " 1))))) "ApaLI: 3 sites") 1 COMMENT 5 "GTGCAC" "CACGTG") COMMENT #39=(CRSFolderPar COMMENT (CFolderPar COMMENT (CGroupPar (CParagraph 83956592 (8 0) 1 1 1 0 178) COMMENT (CObjectList COMMENT #40=(CGroupPar COMMENT (CParagraph 0 (10 #1# 0) 1 2 2 0 180) COMMENT (CObjectList COMMENT #41=(CLinePar COMMENT (CParagraph 0 (1 #1# 1) 1 2 2 0 191) COMMENT " N1: 1181 " 1) COMMENT #42=(CLinePar COMMENT (CParagraph 0 (1 #1# 2) 1 2 2 0 191) COMMENT " N2: 1191 " 1) COMMENT #43=(CLinePar COMMENT (CParagraph 0 (1 #1# 3) 1 2 2 0 191) COMMENT " N3: 3116 " 1))))) "AvaI: 3 sites") 1 5 COMMENT "CYCGRG" "GRGCYC") COMMENT #44=(CRSFolderPar COMMENT (CFolderPar COMMENT (CGroupPar (CParagraph 83956752 (8 0) 1 1 1 0 178) COMMENT (CObjectList COMMENT #45=(CGroupPar COMMENT (CParagraph 0 (10 #2# 0) 1 2 2 0 180) COMMENT (CObjectList COMMENT #46=(CLinePar COMMENT (CParagraph 0 (1 #2# 1) 1 2 2 0 191) COMMENT " N1: 3978 " 1))))) "BamHI: 1 site") 1 5 COMMENT "GGATCC" "CCTAGG") COMMENT #47=(CRSFolderPar COMMENT (CFolderPar COMMENT (CGroupPar (CParagraph 83956912 (8 0) 1 1 1 0 178) COMMENT (CObjectList)) "ClaI: 0 sites") 2 4 "ATCGAT" COMMENT "TAGCTA") COMMENT #48=(CRSFolderPar COMMENT (CFolderPar COMMENT (CGroupPar (CParagraph 83956944 (8 0) 1 1 1 0 178) COMMENT (CObjectList COMMENT #49=(CGroupPar COMMENT (CParagraph 0 (10 #4# 0) 1 2 2 0 180) COMMENT (CObjectList COMMENT #50=(CLinePar COMMENT (CParagraph 0 (1 #4# 1) 1 2 2 0 191) COMMENT " N1: 3149 " 1) COMMENT #51=(CLinePar COMMENT (CParagraph 0 (1 #4# 2) 1 2 2 0 191) COMMENT " N2: 3470 " 1) COMMENT #52=(CLinePar COMMENT (CParagraph 0 (1 #4# 3) 1 2 2 0 191) COMMENT " N3: 3947 " 1))))) "EcoRI: 3 sites") 1 COMMENT 5 "GAATTC" "CTTAAG") COMMENT #53=(CRSFolderPar COMMENT (CFolderPar COMMENT (CGroupPar (CParagraph 83957136 (8 0) 1 1 1 0 178) COMMENT (CObjectList COMMENT #54=(CGroupPar COMMENT (CParagraph 0 (10 #5# 0) 1 2 2 0 180) COMMENT (CObjectList COMMENT #55=(CLinePar COMMENT (CParagraph 0 (1 #5# 1) 1 2 2 0 191) COMMENT " N1: 3996 " 1))))) "HindIII: 1 site") 1 COMMENT 5 "AAGCTT" "TTCGAA") COMMENT #56=(CRSFolderPar COMMENT (CFolderPar COMMENT (CGroupPar (CParagraph 83931696 (8 0) 1 1 1 0 178) COMMENT (CObjectList COMMENT #57=(CGroupPar COMMENT (CParagraph 0 (10 #6# 0) 1 2 2 0 180) COMMENT (CObjectList COMMENT #58=(CLinePar COMMENT (CParagraph 0 (1 #6# 1) 1 2 2 0 191) COMMENT " N1: 1270 " 1) COMMENT #59=(CLinePar COMMENT (CParagraph 0 (1 #6# 2) 1 2 2 0 191) COMMENT " N2: 1706 " 1))))) "NcoI: 2 sites") 1 5 COMMENT "CCATGG" "GGTACC") COMMENT #60=(CRSFolderPar COMMENT (CFolderPar COMMENT (CGroupPar (CParagraph 83931120 (8 0) 1 1 1 0 178) COMMENT (CObjectList COMMENT #61=(CGroupPar COMMENT (CParagraph 0 (10 #7# 0) 1 2 2 0 180) COMMENT (CObjectList COMMENT #62=(CLinePar COMMENT (CParagraph 0 (1 #7# 1) 1 2 2 0 191) COMMENT " N1: 3148 " 1))))) "PstI: 1 site") 5 1 COMMENT "CTGCAG" "GACGTC") COMMENT #63=(CRSFolderPar COMMENT (CFolderPar COMMENT (CGroupPar (CParagraph 83931408 (8 0) 1 1 1 0 178) COMMENT (CObjectList COMMENT #64=(CGroupPar COMMENT (CParagraph 0 (10 #8# 0) 1 2 2 0 180) COMMENT (CObjectList COMMENT #65=(CLinePar COMMENT (CParagraph 0 (1 #8# 1) 1 2 2 0 191) COMMENT " N1: 1183 " 1))))) "SmaI: 1 site") 3 3 COMMENT "CCCGGG" "GGGCCC") COMMENT #66=(CRSFolderPar COMMENT (CFolderPar COMMENT (CGroupPar (CParagraph 83931760 (8 0) 1 1 1 0 178) COMMENT (CObjectList COMMENT #67=(CGroupPar COMMENT (CParagraph 0 (10 #9# 0) 1 2 2 0 180) COMMENT (CObjectList COMMENT #68=(CLinePar COMMENT (CParagraph 0 (1 #9# 1) 1 2 2 0 191) COMMENT " N1: 1181 " 1))))) "XmaI: 1 site") 1 5 COMMENT "CCCGGG" "GGGCCC"))) "Restriction/Methylation Map")))) COMMENT (CGraphView COMMENT (CWStyleSheet COMMENT (CObjectList COMMENT #69=(CWidgetStyle "RSite Label" 1 (LOGPEN 0 0 13408563) 1 0 1 COMMENT (LOGFONT 0 0 0 0 400 0 0 0 0 3 2 1 18 "Georgia") 0.555556 0 1 5 COMMENT "@N (@S)" 0) COMMENT #70=(CWidgetStyle "Signal Label" 1 (LOGPEN 0 0 0) 1 0 1 COMMENT (LOGFONT 0 0 0 0 700 0 0 0 0 3 2 1 34 "Arial") 0.666667 0 1 1 COMMENT "@N" 0) COMMENT #71=(CWidgetStyle "Molecule Label 2" 0 0 1 COMMENT (LOGFONT 0 0 0 0 400 0 0 0 0 3 2 1 18 "Georgia") 0.555556 0 1 16 COMMENT "@L bp" 0) COMMENT #72=(CWidgetStyle "Molecule Label 1" 0 0 1 COMMENT (LOGFONT 0 0 0 0 400 0 0 0 0 3 2 1 34 "Verdana") 0.833333 0 1 1 COMMENT "@N" 0) COMMENT #73=(CWidgetStyle "Shape 3" 1 (LOGPEN 0 0 3355545) 1 1 COMMENT (LOGBRUSH 0 6724095 0) 0 0 1 (LOGSHAPE 9 1 0.8 1.8 0)) COMMENT #74=(CWidgetStyle "Shape 1" 1 (LOGPEN 0 0 6723840) 1 1 COMMENT (LOGBRUSH 0 10079334 0) 0 0 1 (LOGSHAPE 9 1 0.8 1.8 0)) COMMENT #75=(CWidgetStyle "Axis" 1 (LOGPEN 0 0 10079436) 2 1 COMMENT (LOGBRUSH 0 13434879 0) 0 0 1 (LOGSHAPE 10 1 0 0 0)) COMMENT #76=(CWidgetStyle "Line 2" 1 (LOGPEN 0 0 6723840) 8 0 0 0 1 COMMENT (LOGSHAPE 1 1.9 0 0 0)) COMMENT #77=(CWidgetStyle "RSite" 1 (LOGPEN 0 0 10053171) 8 0 0 0 1 COMMENT (LOGSHAPE 1 1.9 0 0 0)) COMMENT #78=(CWidgetStyle "Short Signal" 1 (LOGPEN 0 0 13395507) 10 0 0 0 1 COMMENT (LOGSHAPE 1 1.9 0 0 0)) COMMENT #79=(CWidgetStyle "Uniq RSite Label" 1 (LOGPEN 0 0 153) 1 0 1 COMMENT (LOGFONT 0 0 0 0 400 0 0 0 0 3 2 1 18 "Georgia") 0.555556 128 1 5 COMMENT "@N (@S)" 0) COMMENT #80=(CWidgetStyle "Vanilla" 1 (LOGPEN 0 0 0) 1 1 COMMENT (LOGBRUSH 0 16777215 0) 1 COMMENT (LOGFONT 0 0 0 0 400 0 0 0 0 7 48 2 18 "Times New Roman") 0.8 0 1 COMMENT 2 "?" 0) COMMENT #81=(CWidgetStyle "Mark 1" 0 0 1 COMMENT (LOGFONT 0 0 0 0 400 0 0 0 2 7 48 2 2 "Windings") 0.7 0 1 2 "?" 0) COMMENT #82=(CWidgetStyle "Motif Label" 1 (LOGPEN 0 0 16744512) 1 0 1 COMMENT (LOGFONT 0 0 0 0 400 0 0 0 0 3 2 1 34 "Arial") 0.611111 8388608 1 COMMENT 65535 "@N (@H)" 0) COMMENT #83=(CWidgetStyle "Fragment Label 2" 1 (LOGPEN 0 0 0) 1 0 1 COMMENT (LOGFONT 0 0 0 0 400 0 0 0 0 3 2 1 49 "Courier New") 1.05 0 1 48 COMMENT "@F bp (molecule @L bp)" 0) COMMENT #84=(CWidgetStyle "Fragment Label 1" 1 (LOGPEN 0 0 0) 1 0 1 COMMENT (LOGFONT 0 0 0 0 400 0 0 0 0 3 2 1 34 "Arial") 0.91 0 1 1 COMMENT "Fragment of @N" 0) COMMENT #85=(CWidgetStyle "Shape 4" 1 (LOGPEN 0 0 0) 1 1 COMMENT (LOGBRUSH 2 8388608 5) 0 0 0) COMMENT #86=(CWidgetStyle "Shape 2" 1 (LOGPEN 0 0 0) 1 1 (LOGBRUSH 0 128 0) 0 COMMENT 0 0) COMMENT #87=(CWidgetStyle "Shape 0" 1 (LOGPEN 0 0 0) 1 1 (LOGBRUSH 0 0 0) 0 0 COMMENT 0) COMMENT #88=(CWidgetStyle "ORF" 1 (LOGPEN 0 0 16384) 8 0 0 0 1 COMMENT (LOGSHAPE 7 0.2 3.41182 2.86186 0.609808)) COMMENT #89=(CWidgetStyle "Line 4" 1 (LOGPEN 0 0 32768) 8 0 0 0 0) COMMENT #90=(CWidgetStyle "Line 3" 1 (LOGPEN 0 0 16711680) 8 0 0 0 0) COMMENT #91=(CWidgetStyle "Line 1" 1 (LOGPEN 0 0 16711680) 1 0 0 0 0) COMMENT #92=(CWidgetStyle "Short Promoter" 1 (LOGPEN 0 0 128) 6 0 0 0 0) COMMENT #93=(CWidgetStyle "Motif" 1 (LOGPEN 0 0 0) 1 0 0 0 0) COMMENT #94=(CWidgetStyle "Line 0" 1 (LOGPEN 0 0 0) 8 0 0 0 0) COMMENT #95=(CWidgetStyle "Void" 0 0 0 0 0) COMMENT #96=(CWidgetStyle "General Label" 1 (LOGPEN 0 0 0) 1 0 1 COMMENT (LOGFONT 0 0 0 0 400 0 0 0 0 3 2 1 18 "Times New Roman") 0.91 0 1 COMMENT 3 "@T @N " 0) COMMENT #97=(CWidgetStyle "Position" 1 (LOGPEN 0 0 0) 1 0 0 0 0) COMMENT #98=(CWidgetStyle "Annotation" 0 0 1 COMMENT (LOGFONT 0 0 0 0 400 0 0 0 0 3 2 1 18 "Times New Roman") 0.91 0 0 COMMENT 0) COMMENT #99=(CWidgetStyle "Position Label" 1 (LOGPEN 0 0 8388608) 1 0 1 COMMENT (LOGFONT 0 0 0 0 400 0 1 0 0 3 2 1 34 "Arial") 0.63 8388608 1 1 COMMENT "@N" 0) COMMENT #100=(CWidgetStyle "Range" 1 (LOGPEN 0 0 0) 1 1 COMMENT (LOGBRUSH 0 16777215 0) 0 0 0) COMMENT #101=(CWidgetStyle "Range Label" 1 (LOGPEN 0 0 8388608) 1 0 1 COMMENT (LOGFONT 0 0 0 0 400 0 1 0 0 3 2 1 34 "Arial") 0.63 8388608 1 1 COMMENT "@N" 0) COMMENT #102=(CWidgetStyle "ORF Label" 1 (LOGPEN 0 0 49216) 1 0 1 COMMENT (LOGFONT 0 0 0 0 400 0 0 0 0 3 2 1 18 "Times New Roman") COMMENT 0.611111 0 1 65535 "@N" 0) COMMENT #103=(CWidgetStyle "CDS Label" 1 (LOGPEN 0 0 4227264) 1 0 1 COMMENT (LOGFONT 0 0 0 0 400 0 0 0 0 3 2 1 34 "Arial") 0.555556 255 1 1 COMMENT "@N" 0) COMMENT #104=(CWidgetStyle "Shape 5" 1 (LOGPEN 0 0 0) 3 1 COMMENT (LOGBRUSH 0 16777113 0) 1 COMMENT (LOGFONT 0 0 0 0 400 0 0 0 0 7 48 2 50 "Arial") 0.9 0 0 1 COMMENT (LOGSHAPE 9 1 0.8 1.8 0)) COMMENT #105=(CWidgetStyle "CDS" 1 (LOGPEN 0 0 0) 1 1 (LOGBRUSH 2 39423 3) 0 0 COMMENT 1 (LOGSHAPE 9 1 0.8 1.8 0)) COMMENT #106=(CWidgetStyle "Label 2" 1 (LOGPEN 0 0 4227264) 1 0 1 COMMENT (LOGFONT 0 0 0 0 400 0 0 0 0 3 2 1 34 "Arial") 0.944444 8388608 COMMENT 1 1 "@N" 0) COMMENT #107=(CWidgetStyle "Label 3" 1 (LOGPEN 0 0 8421376) 1 0 1 COMMENT (LOGFONT 0 0 0 0 700 255 0 0 0 3 2 1 34 "Arial") 0.833333 255 1 COMMENT 5 "@N (@S)" 0) COMMENT #108=(CWidgetStyle "Label 4" 1 (LOGPEN 0 0 8437824) 1 0 1 COMMENT (LOGFONT 0 0 0 0 400 0 0 0 0 3 2 1 34 "Arial") 0.722222 0 1 5 COMMENT "@N (@S)" 0)) 0.164644 1.74233 0.164644 2.53336 COMMENT (70 (CShapeMapEntry 0 "Unique RSite" 1 "Uniq RSite Label") 67 COMMENT (CShapeMapEntry 0 "ORF" 0 "ORF Label")) 40.0378 40.0378 39 39 0.1 -365) COMMENT 1 1 0 1 1 COMMENT (mapper: 28.2239 -14.4267 40.0378 40.0378 0.01 10 -1 4273 4273 1 0 0) COMMENT #109=(CGroupWidget (CWidget 0 (0 0) 1 2 0 0 Nil 1314005044 100) COMMENT (CObjectList COMMENT #110=(CGroupWidget (CWidget 1 (0 0) 1 2 0 0 Nil 1 100) COMMENT (CObjectList COMMENT #111=(CAxis COMMENT (CWideLine (CWidget 0 (0 0) 1 2 0 0 #75# 84310772 0) COMMENT (LOGPEN 0 0 10079436) 2 (LOGBRUSH 0 13434879 0) 1 COMMENT 6.27565 6.27365 1 0.0214037) 0.14681) COMMENT #112=(CLabel (CWidget 1001 (0 0) 1 2 0 0 #72# 0 100) COMMENT (LOGPEN 0 0 0) 0 COMMENT (LOGFONT 58 22 0 0 400 0 0 0 0 3 2 1 34 "Verdana") COMMENT 1.74233 0.833333 0 COMMENT "CS810-Final-03-TB-T4 RNA Ligase 2, truncated K227Q" COMMENT "@N" 1 0 0.871165 0 -10 32.0447 1.34873 Nil) COMMENT #113=(CLabel (CWidget 1002 (0 0) 1 2 0 0 #71# 0 100) COMMENT (LOGPEN 0 0 0) 0 COMMENT (LOGFONT 38 14 0 0 400 0 0 0 0 3 2 1 18 "Georgia") COMMENT 1.74233 0.555556 0 "4273 bp" "@L bp" 16 0 -0.871165 COMMENT 0 -10.8 3.34684 0.949103 Nil)) (CObjectList)) COMMENT #114=(CGroupWidget (CWidget 10 (6 0) 1 2 0 0 Nil 0 100) COMMENT (CObjectList COMMENT #115=(CGroupWidget (CWidget 21 (7 21 0) 1 2 0 0 Nil 9 100) COMMENT (CObjectList COMMENT #116=(CWideArrow COMMENT (CWideLine COMMENT (CWidget 0 (3 #10# 0) 1 2 0 0 #74# 538976288 COMMENT 100) (LOGPEN 0 0 6723840) 1 COMMENT (LOGBRUSH 0 10079334 0) 1 0.512366 1.61344 1 COMMENT 0.082322) 0.8 1.8 0) COMMENT #117=(CLabel (CWidget 0 (0 0) 1 2 0 0 #70# 0 100) COMMENT (LOGPEN 0 0 0) 1 COMMENT (LOGFONT 46 17 0 0 700 0 0 0 0 3 2 1 34 COMMENT "Arial") 1.74233 0.666667 0 COMMENT "T4 RNA Ligase 2,truncated K227Q" "@N" 1 COMMENT -18.6057 5.22699 0 -10 15.7351 1.07399 #116#)) COMMENT (CObjectList))) (CObjectList)) COMMENT #118=(CGroupWidget (CWidget 11 (8 0) 1 2 0 0 Nil 1314005044 100) COMMENT (CObjectList COMMENT #119=(CGroupWidget COMMENT (CWidget 1 (10 #2# 0) 1 2 0 0 Nil 0 100) COMMENT (CObjectList COMMENT #120=(CScratch COMMENT (CWidget 1 (1 #2# 1) 1 2 0 0 #77# 84565840 COMMENT 100) (LOGPEN 0 6 10053171) 8 1 0.434557 1.9 COMMENT 0.082322 1) COMMENT #121=(CLabel COMMENT (CWidget 0 (0 0) 1 2 0 0 #79# 1489881917 100) COMMENT (LOGPEN 0 0 153) 1 COMMENT (LOGFONT 38 14 0 0 400 0 0 0 0 3 2 1 18 COMMENT "Georgia") 1.74233 0.555556 128 COMMENT "{\\i Bam}HI (3978)" "@N (@S)" 5 -9.15669 COMMENT 10.454 0 -10 5.74457 0.949103 #120#)) COMMENT (CObjectList)) COMMENT #122=(CGroupWidget COMMENT (CWidget 1 (10 #5# 0) 1 2 0 0 Nil 1314005044 100) COMMENT (CObjectList COMMENT #123=(CScratch COMMENT (CWidget 1 (1 #5# 1) 1 2 0 0 #77# 83847872 COMMENT 100) (LOGPEN 0 6 10053171) 8 1 0.408131 1.9 COMMENT 0.082322 1) COMMENT #124=(CLabel (CWidget 0 (0 0) 1 2 0 0 #79# 0 100) COMMENT (LOGPEN 0 0 153) 1 COMMENT (LOGFONT 38 14 0 0 400 0 0 0 0 3 2 1 18 COMMENT "Georgia") 1.74233 0.555556 128 COMMENT "{\\i Hin}dIII (3996)" "@N (@S)" 5 -8.29807 COMMENT 12.1963 0 -10 5.69462 0.949103 #123#)) COMMENT (CObjectList)) COMMENT #125=(CGroupWidget COMMENT (CWidget 1 (10 #7# 0) 1 2 0 0 Nil 1314005044 100) COMMENT (CObjectList COMMENT #126=(CScratch COMMENT (CWidget 1 (1 #7# 1) 1 2 0 0 #77# 2084851538 COMMENT 100) (LOGPEN 0 6 10053171) 8 1 1.65308 1.9 COMMENT 0.082322 1) COMMENT #127=(CLabel (CWidget 0 (0 0) 1 2 0 0 #79# 363 100) COMMENT (LOGPEN 0 0 153) 1 COMMENT (LOGFONT 38 14 0 0 400 0 0 0 0 3 2 1 18 COMMENT "Georgia") 1.74233 0.555556 128 COMMENT "{\\i Pst}I (3148)" "@N (@S)" 5 -13.9553 COMMENT -1.74233 0 -10 4.47078 0.949103 #126#)) COMMENT (CObjectList)) COMMENT #128=(CGroupWidget COMMENT (CWidget 1 (10 #8# 0) 1 2 0 0 Nil 0 100) COMMENT (CObjectList COMMENT #129=(CScratch COMMENT (CWidget 1 (1 #8# 1) 1 2 0 0 #77# 2084851538 COMMENT 100) (LOGPEN 0 6 10053171) 8 1 4.53789 1.9 COMMENT 0.082322 1) COMMENT #130=(CLabel (CWidget 0 (0 0) 1 2 0 0 #79# 0 100) COMMENT (LOGPEN 0 0 153) 1 COMMENT (LOGFONT 38 14 0 0 400 0 0 0 0 3 2 1 18 COMMENT "Georgia") 1.74233 0.555556 128 COMMENT "{\\i Sma}I (1183)" "@N (@S)" 5 14.0953 COMMENT -3.48466 0 -10 4.94533 0.949103 #129#)) COMMENT (CObjectList)) COMMENT #131=(CGroupWidget COMMENT (CWidget 1 (10 #9# 0) 1 2 0 0 Nil 1484916712 100) COMMENT (CObjectList COMMENT #132=(CScratch COMMENT (CWidget 1 (1 #9# 1) 1 2 0 0 #77# 84560920 COMMENT 100) (LOGPEN 0 6 10053171) 8 1 4.54083 1.9 COMMENT 0.082322 1) COMMENT #133=(CLabel COMMENT (CWidget 0 (0 0) 1 2 0 0 #79# 268673104 100) COMMENT (LOGPEN 0 0 153) 1 COMMENT (LOGFONT 38 14 0 0 400 0 0 0 0 3 2 1 18 COMMENT "Georgia") 1.74233 0.555556 128 COMMENT "{\\i Xma}I (1181)" "@N (@S)" 5 14.1885 0 0 COMMENT -10 4.94533 0.949103 #132#)) (CObjectList)) COMMENT #134=(CGroupWidget COMMENT (CWidget 2 (10 #6# 0) 1 2 0 0 Nil 0 100) COMMENT (CObjectList COMMENT #135=(CScratch COMMENT (CWidget 1 (1 #6# 1) 1 2 0 0 #77# 84565680 COMMENT 100) (LOGPEN 0 6 10053171) 8 1 4.41017 1.9 COMMENT 0.082322 1) COMMENT #136=(CLabel (CWidget 0 (0 0) 1 2 0 0 #69# 0 100) COMMENT (LOGPEN 0 0 13408563) 1 COMMENT (LOGFONT 38 14 0 0 400 0 0 0 0 3 2 1 18 COMMENT "Georgia") 1.74233 0.555556 0 COMMENT "{\\i Nco}I (1270)" "@N (@S)" 5 13.9382 COMMENT -6.96932 0 -10 4.79547 0.949103 #135#) COMMENT #137=(CScratch COMMENT (CWidget 2 (1 #6# 2) 1 2 0 0 #77# 84565040 COMMENT 100) (LOGPEN 0 6 10053171) 8 1 3.77008 1.9 COMMENT 0.082322 1) COMMENT #138=(CLabel (CWidget 0 (0 0) 1 2 0 0 #69# 0 100) COMMENT (LOGPEN 0 0 13408563) 1 COMMENT (LOGFONT 38 14 0 0 400 0 0 0 0 3 2 1 18 COMMENT "Georgia") 1.74233 0.555556 0 COMMENT "{\\i Nco}I (1706)" "@N (@S)" 5 9.84118 COMMENT -10.454 0 -10 4.79547 0.949103 #137#)) COMMENT (CObjectList)) COMMENT #139=(CGroupWidget COMMENT (CWidget 3 (10 #0# 0) 1 2 0 0 Nil 1507788429 100) COMMENT (CObjectList COMMENT #140=(CScratch COMMENT (CWidget 1 (1 #0# 1) 1 2 0 0 #77# 2084851538 COMMENT 100) (LOGPEN 0 6 10053171) 8 1 5.63897 1.9 COMMENT 0.082322 1) COMMENT #141=(CLabel (CWidget 0 (0 0) 1 2 0 0 #69# 0 100) COMMENT (LOGPEN 0 0 13408563) 1 COMMENT (LOGFONT 38 14 0 0 400 0 0 0 0 3 2 1 18 COMMENT "Georgia") 1.74233 0.555556 0 COMMENT "{\\i Apa}LI (433)" "@N (@S)" 5 10.9494 COMMENT 8.71165 0 -10 4.79547 0.949103 #140#) COMMENT #142=(CScratch COMMENT (CWidget 2 (1 #0# 2) 1 2 0 0 #77# 41561536 COMMENT 100) (LOGPEN 0 6 10053171) 8 1 4.91519 1.9 COMMENT 0.082322 1) COMMENT #143=(CLabel (CWidget 0 (0 0) 1 2 0 0 #69# 997 100) COMMENT (LOGPEN 0 0 13408563) 1 COMMENT (LOGFONT 38 14 0 0 400 0 0 0 0 3 2 1 18 COMMENT "Georgia") 1.74233 0.555556 0 COMMENT "{\\i Apa}LI (926)" "@N (@S)" 5 14.1559 COMMENT 1.74233 0 -10 4.79547 0.949103 #142#) COMMENT #144=(CScratch COMMENT (CWidget 3 (1 #0# 3) 1 2 0 0 #77# 41850296 COMMENT 100) (LOGPEN 0 6 10053171) 8 1 2.16545 1.9 COMMENT 0.082322 1) COMMENT #145=(CLabel (CWidget 0 (0 0) 1 2 0 0 #69# 754 100) COMMENT (LOGPEN 0 0 13408563) 1 COMMENT (LOGFONT 38 14 0 0 400 0 0 0 0 3 2 1 18 COMMENT "Georgia") 1.74233 0.555556 0 COMMENT "{\\i Apa}LI (2799)" "@N (@S)" 5 -12.7563 COMMENT -6.96932 0 -10 5.34495 0.949103 #144#)) COMMENT (CObjectList)) COMMENT #146=(CGroupWidget COMMENT (CWidget 3 (10 #1# 0) 1 2 0 0 Nil 1314005044 100) COMMENT (CObjectList COMMENT #147=(CScratch COMMENT (CWidget 1 (1 #1# 1) 1 2 0 0 #77# 41609784 COMMENT 100) (LOGPEN 0 6 10053171) 8 1 4.54083 1.9 COMMENT 0.082322 1) COMMENT #148=(CLabel (CWidget 0 (0 0) 1 2 0 0 #69# 0 100) COMMENT (LOGPEN 0 0 13408563) 1 COMMENT (LOGFONT 38 14 0 0 400 0 0 0 0 3 2 1 18 COMMENT "Georgia") 1.74233 0.555556 0 COMMENT "{\\i Ava}I (1181)" "@N (@S)" 5 13.9207 COMMENT -1.74233 0 -10 4.67059 0.949103 #147#) COMMENT #149=(CScratch COMMENT (CWidget 2 (1 #1# 2) 1 2 0 0 #77# 41919496 COMMENT 100) (LOGPEN 0 6 10053171) 8 1 4.52615 1.9 COMMENT 0.082322 1) COMMENT #150=(CLabel (CWidget 0 (0 0) 1 2 0 0 #69# 0 100) COMMENT (LOGPEN 0 0 13408563) 1 COMMENT (LOGFONT 38 14 0 0 400 0 0 0 0 3 2 1 18 COMMENT "Georgia") 1.74233 0.555556 0 COMMENT "{\\i Ava}I (1191)" "@N (@S)" 5 14.024 COMMENT -5.22699 0 -10 4.67059 0.949103 #149#) COMMENT #151=(CScratch COMMENT (CWidget 3 (1 #1# 3) 1 2 0 0 #77# 41862104 COMMENT 100) (LOGPEN 0 6 10053171) 8 1 1.70006 1.9 COMMENT 0.082322 1) COMMENT #152=(CLabel (CWidget 0 (0 0) 1 2 0 0 #69# 0 100) COMMENT (LOGPEN 0 0 13408563) 1 COMMENT (LOGFONT 38 14 0 0 400 0 0 0 0 3 2 1 18 COMMENT "Georgia") 1.74233 0.555556 0 COMMENT "{\\i Ava}I (3116)" "@N (@S)" 5 -14.064 COMMENT -3.48466 0 -10 4.74552 0.949103 #151#)) COMMENT (CObjectList)) COMMENT #153=(CGroupWidget COMMENT (CWidget 3 (10 #4# 0) 1 2 0 0 Nil 32768 100) COMMENT (CObjectList COMMENT #154=(CScratch COMMENT (CWidget 1 (1 #4# 1) 1 2 0 0 #77# 83848232 COMMENT 100) (LOGPEN 0 6 10053171) 8 1 1.65161 1.9 COMMENT 0.082322 1) COMMENT #155=(CLabel COMMENT (CWidget 0 (0 0) 1 2 0 0 #69# 1065 100) COMMENT (LOGPEN 0 0 13408563) 1 COMMENT (LOGFONT 38 14 0 0 400 0 0 0 0 3 2 1 18 COMMENT "Georgia") 1.74233 0.555556 0 COMMENT "{\\i Eco}RI (3149)" "@N (@S)" 5 -14.3801 0 0 COMMENT -10 5.22007 0.949103 #154#) COMMENT #156=(CScratch COMMENT (CWidget 2 (1 #4# 2) 1 2 0 0 #77# 41609208 COMMENT 100) (LOGPEN 0 6 10053171) 8 1 1.18035 1.9 COMMENT 0.082322 1) COMMENT #157=(CLabel (CWidget 0 (0 0) 1 2 0 0 #69# 791 100) COMMENT (LOGPEN 0 0 13408563) 1 COMMENT (LOGFONT 38 14 0 0 400 0 0 0 0 3 2 1 18 COMMENT "Georgia") 1.74233 0.555556 0 COMMENT "{\\i Eco}RI (3470)" "@N (@S)" 5 -14.0029 COMMENT 3.48466 0 -10 5.295 0.949103 #156#) COMMENT #158=(CScratch COMMENT (CWidget 3 (1 #4# 3) 1 2 0 0 #77# 83848192 COMMENT 100) (LOGPEN 0 6 10053171) 8 1 0.480068 1.9 COMMENT 0.082322 1) COMMENT #159=(CLabel (CWidget 0 (0 0) 1 2 0 0 #69# 0 100) COMMENT (LOGPEN 0 0 13408563) 1 COMMENT (LOGFONT 38 14 0 0 400 0 0 0 0 3 2 1 18 COMMENT "Georgia") 1.74233 0.555556 0 COMMENT "{\\i Eco}RI (3947)" "@N (@S)" 5 -11.1584 COMMENT 8.71165 0 -10 5.295 0.949103 #158#)) COMMENT (CObjectList))) (CObjectList)) COMMENT #160=(CGroupWidget (CWidget 14 (16 0) 1 2 0 0 Nil 1497368106 100) COMMENT (CObjectList) (CObjectList)) COMMENT #161=(CGroupWidget (CWidget 12 (0 0) 1 2 0 0 Nil 1 100) COMMENT (CObjectList) (CObjectList))) (CObjectList))) COMMENT (CSeqView 10 10 (CObjectList #162=(XLATFRAGMENT 3174 249 0 1 3175 749)) COMMENT (CObList #163=(AnlzXLATItem 3174 3923 1 3174 3923)) 1 (CObList)) COMMENT (CObList) 83842456 (CStringList) 83846056 83847216 (CObList))) FEATURES Location/Qualifiers misc_feature 3175..3924 /vntifkey="21" /label=T4\RNA\Ligase\2,truncated\K227Q BASE COUNT 1044 a 1098 c 1096 g 1035 t ORIGIN 1 cttccgcttc ctcgctcact gattcgctgc gctcggtcgt tcggctgcgg cgagcggtat 61 cagtcactca aaggcggtaa tacggttatc cacagaatca ggggataacg caggaaagaa 121 catgtgagca aaaggccagc aaaagcccag gaaccgtaaa aaggccgcgt tgctggcgtt 181 tttccatagg tccgcccccc tgacgagcat cacaaaaatc gacgctcaag tcagaggtgg 241 cgaaacccga caggactata aagataccag gcgtttcccc ctggaagctc cctcgtgcgc 301 tctcctgttc cgaccctccg cttaccggat acctgtccgc ctttctccct tcgggaagcg 361 tggcgctttc tcatagctca cgctgtaggt atctcagttc ggtgtaggtc gttcgctcca 421 agctgggctg tgtgcacgaa cccccgttca gcccgaccgc tgcgccttat ccggtaacta 481 tcgtcttgat tccaacccgg taagacacga cttatcgcca ctggcagcag ccactggtaa 541 caggattagc agagcgaggt atgtaggcgg tctacagagt tcttgaagtg gtggcctaac 601 tacggctaca ctagaaggac agtatttggt atctgcgctc tgctgaagcc agttaccttc 661 ggaaaaagag ttggtagctc ttgatccggc aaacaaacac cgctggtagc ggtggttttt 721 ttgtttgcaa gcagcagatt acgcgcagaa aaaaaggatc tcaagaagat cctttgatct 781 tttctacggg gtctgacgct cagtggaacg aaaactcacg ttaaggattt tggtcatgag 841 attatcaaaa aggatcttca cctagatcct tttaaattaa aaatgaagtt ttagcacgtg 901 tcagtcctgc tcctcggcca cgaagtgcac gcagttgccg gccgggtcgc gcgggcgaac 961 tcccgccccc acggctgctc gccgatctcg gtcatggccg gcccggaggc gtcccggaag 1021 ttcgtggaca cgacctccga ccactcggcg tacagctcgt ccaggccgcg cacccacacc 1081 aggccagggt gttgtccggc accacctggt cctggaccgc gctgatgaac agggtcacgt 1141 cgtcccggac cacaccggcg aagtcgtcct ccacgaagtc ccgggagaac ccgagccggt 1201 cggtccgaac tcgaccgctc cggcgacgtc gcgcgcggtg agcaccggaa cggcactggt 1261 caacttggcc atggtggccc tcctcacgtg ctattattga agcatttatc agggttattg 1321 tctcatgagc ggaacatatt tgaatgtatt tagaaaaata aacaaatagg ggttccgcgc 1381 acatttcccc gaaaagtgcc acctgtatgc ggtgtgaaat accgcacaga tgcgtaagga 1441 gaaaataccg catcaggaaa tgtaagcgtt aataattcag aagaactcgt caagaaggcg 1501 atagaaggcg atgcgctgcg aatcgggagc ggcgataccg taaagcacga ggaagcggtc 1561 agcccattcg ccgccaagct cttcagcata tcacgggtag ccaacgctat gtcctgatag 1621 cggtccgcca cacccagccg gccacagtcg atgaatccag aaaagcggcc attttccacc 1681 atgatattcg gcaagcaggc atcgccatgg gtcagacgag atcctcgccg tcgggcatgc 1741 tcgccttgag cctggcgaac agttcggctg gcgcgagccc ctgatgctct tcgtccagat 1801 catcctgatc gacaagaccg gcttccatcc gagtacgtgc tgctcgatgc gatgtttcgc 1861 ttggtggtcg aatgggcagg tagccggatc aagcgtatgc agccgccgca ttgcatcagc 1921 catgatggat actttctcgg caggagcaag gtgagatgac aggagatctg ccccggcact 1981 tcgcccaata gcagccagtc ccttcccgct tcagtgacaa cgtcgagcac agctgcgcaa 2041 ggaacgcccg tcgtggccag ccacgatagc cgcgctgcct cgtcttgcag ttcatcaggg 2101 caccggacag gtcggtcttg acaaaaagaa ccgggcgccc ctgcgctgac agccggaaca 2161 cggcggcatc agagcagccg attgtctgtt gtgcccagtc atagccgaat agcctctcca 2221 ccaagcggcc ggagaacctg cgtgcaatcc atcttgttca atcatgcgaa acgatcctca 2281 tcctgtctct tgatcagagc ttgatcccct gcgccatcag atccttggcg gcgagaaagc 2341 catccagtta ctttgcaggg cttcccaacc ttaccagagg gcgccccagc tggcaattcc 2401 ggttcgcttg ctgtccataa aaccgcccag tctagctatc gccatgtaag cccactgcaa 2461 gctacctgct ttctcttgcg cttgcgtttt cccttgtcca gatagcccag tagctgacat 2521 tcatccgggg tcagcaccgt ttctgcggac tggctttcta cgtgaaaagg atctaggtga 2581 agatcctttt tgataatctc atgctgacat ttatattccc cagaacatca ggttaatggc 2641 gtttttgatg tcattttcgc ggtggctgag atcagccact tcttccccga taacggagac 2701 cggcacactg gccatatcgg tggtcatcat cgccagcttt catccccgat atgcaccacc 2761 gggtaaagtt cacgggagac tttatctgac agcagacgtg cactggccag ggggatcacc 2821 atccgtcgcc ccggcgtgtc aataatatca ctctgtaatc cacaaacaga cgataacggc 2881 tctctctttt ataggtgtaa accttaaact gccgtacgta taggctgcgc aactgttggg 2941 aagggcgatc ggtgcgggcc tcttcgctat tacgccagct ggcgaagggg gatgtgctgc 3001 aaggcgatta agttgggtaa cgccagggtt ttcccagtca cgacgttgta aaacgacggc 3061 cagtgaattg taatacgatt cactataggg cgaattgggc cctctagatg catgctcgag 3121 cggccgccag tgtgatggat atctgcagaa ttcgcccttg aacagattgg tgggatgttt 3181 aaaaagtata gcagtcttga aaatcattac aactctaaat ttattgaaaa actttatagc 3241 ttgggattga ctggtgggga gtgggtagct cgtgaaaaga ttcacggcac aaatttctca 3301 ttgattattg agcgtgataa agtgacttgc gctaaacgca ctggaccgat tcttcctgct 3361 gaagatttct ttgggtatga aattattttg aagaattatg ctgattccat taaagctgta 3421 caagatatta tggaaacctc agcggttgta tcttatcaag tctttggcga attcgctgga 3481 cctggcattc agaagaatgt tgattattgt gataaagatt tttatgtatt tgacattatt 3541 gttactacag aaagcggtga tgtgacttat gtagatgatt atatgatgga atcattctgt 3601 aatacattta aatttaaaat ggctccactt ttaggtcgcg gtaaatttga agagcttatt 3661 aaattgccaa atgatttaga ttctgtcgtc caagattata attttacagt agaccatgct 3721 ggattagttg atgcaaataa atgcgtttgg aatgccgaag caaaaggcga agtatttact 3781 gctgaaggat atgtattgaa accttgttat ccttcttggc ttcgtaatgg aaatcgtgta 3841 gcgattaaat gccagaactc taaatttagt gaaaagaaaa agtctgataa gcctattaaa 3901 gctaaagttg agctatcaga ataagtaccg tctaaactca agggcgaatt ccagcacact 3961 ggcggccgtt actagtggat ccgagctcgg taccaagctt gatgcatagc ttgagtattt 4021 atagtgtcac ctaaatagct tggcgtaatc atggtcatag ctgtttcctg tgtgaaattg 4081 ttatccgctc acaattccac acaacatacg agccggaagc ataaagtgta aagcctgggg 4141 tgcctatgag tgagctaact cacattaatt gcgttgcgct cactgcccgc tttccagtcg 4201 ggaaacctgt cgtgccagct gcattaatga atcggccaac gcgcggggag aggcggtttg 4261 cgtattgggc gct //